Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922182.1_cds_XP_016470990.1_63382
CDS Infomation

[gene=LOC107793207] [db_xref=GeneID:107793207] [protein=probable N-succinyldiaminopimelate aminotransferase DapC] [protein_id=XP_016470990.1] [location=complement(join(255735..256886,260183..260389))] [gbkey=CDS]
Sequence

ATGCAAATCTCTCGGCCAATCCAATGTACCTGGACACCTCAGTATTATTCACATGAGATG
CTGAGGAGCTTCAAACCCTATATTTCCCGCACCTTTAGAAGCAGAAAATACCCTTTTCCA
ATGGCGAATTTGTCCACCGTTTCAACACAGAAAGAGGCTGTTTCTACTAAAGATGAGTCA
ACCCAGATAGTCCCTAAGCCTTTGCAGGTTGCTAAGCGCCTAGAGAAGTTCAAAACTACA
ATTTTCACCCAAATGAGTATGCTAGCCATCAAGCATGGAGCTATAAACCTTGGCCAGGGC
TTTCCCAACTTTGACGGCCCTGATTTTGTAAAAGAAGCAGCTATTCAAGGCATTAAGGAA
GGTAAAAATCAGTATGCTCGAGGATATGGAGTCCCAGACCTCAACTCTGCTGTGGCTGCT
AGATTCAAGAAAGACAGTGGACTTGAGGTTGACCCTGAAAAGGAAGTTACTGTGACTTCG
GGCTGCACCGAAGCAATTGCTGCAACCATTTTGGGTTTGATAAACCCTGGTGATGAGGTT
ATCCTGTTTGCTCCTTTCTATGATTCTTATGAGGCTACTTTATCTATGGCTGGAGCAAAG
ATAAAGGGTATTACTTTAAGACCGCCAGATTTTTCTCTTCCGATTGATGAGCTAAAAGCA
GCAGTATCAAAGAATACTCGAGCAATCCTTCTAAACACTCCTCATAACCCCACAGGGAAG
ATGTTCACTCGAGAAGAACTCAATGCCATTGCCTCTCTGTGCATTGAGAATGATATTCTA
GTTTTTGCTGACGAAGTATATGACAAATTAGCCTTTGAAATGGAACATATTTCAATTGCT
TCTCTTCCGGGGATGTACGAACGAACTGTGACCATGAATTCTTTGGGAAAGACATTTTCG
CTAACAGGCTGGAAAATAGGTTGGGCGATTGCTCCTCCTCATTTGACATGGGGAGTAAGA
CAGGCTCATTCCTACCTTACCTTTGCAACATCCACTCCGATGCAATATGCAGCAGCGACG
GCCCTTAGAGCCCCAGATTCTTATTATGAGGAGCTTAAGAGGGATTACTCGGCCAAAAAG
GCAATATTGGTGGAGGGGTTAAAGGCAGCTGGTTTCACAGTATACCCCTCGAGCGGAACG
TATTTTGTAGTTGTTGATCACACTCCTTTTGGGCTAGAAAATGACATTGCCTTCTGCGAA
TACCTGATCAAGGAAGTTGGTGTTGTAGCCATTCCAACTAGCGTATTCTATCTAAATCCA
GAAGAAGGAAAGAATCTTGTCAGGTTTACCTTCTGCAAAGATGATGATACTCTTAAAAGT
GCAGTGCAGAGGATGAAGGAGAAGCTGTCAAAGAAGTGA

Peptide Sequence

PEP ID

XP_016470990.1
PEP Infomation

PREDICTED: probable N-succinyldiaminopimelate aminotransferase DapC [Nicotiana tabacum]
Sequence

MQISRPIQCTWTPQYYSHEMLRSFKPYISRTFRSRKYPFPMANLSTVSTQKEAVSTKDES
TQIVPKPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQGIKE
GKNQYARGYGVPDLNSAVAARFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEV
ILFAPFYDSYEATLSMAGAKIKGITLRPPDFSLPIDELKAAVSKNTRAILLNTPHNPTGK
MFTREELNAIASLCIENDILVFADEVYDKLAFEMEHISIASLPGMYERTVTMNSLGKTFS
LTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQYAAATALRAPDSYYEELKRDYSAKK
AILVEGLKAAGFTVYPSSGTYFVVVDHTPFGLENDIAFCEYLIKEVGVVAIPTSVFYLNP
EEGKNLVRFTFCKDDDTLKSAVQRMKEKLSKK

Transcript Sequence

Gene sequence data has not been registered.